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Messages - Mark Viant
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Environmental Metabolomics Interest Group / eMICE_2011 Environmental Metabolomics Intercomparison Update
Thank you again to all the participating labs!
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Environmental Metabolomics Interest Group / Metabolomics special issue from 2009
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Data Analysis Interest Group / Welcome to the Data Analysis Interest Group forum
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Standards & Databases Interest Group / Rumours of the death of MSI have been greatly exaggerated......
In fact we also very recently published an NMR metabolite library, which is held in a new MSI-compliant database at the University of Birmingham.
For those that are interested, the paper \"Birmingham Metabolite Library: a publicly accessible database of 1-D 1H and 2-D 1H J-resolved NMR spectra of authentic metabolite standards (BML-NMR)\", by Ludwig et al., can be found at:
http://www.springerlink.com/content/er1713p572008387/
We based our database on the MSI-endorsed reporting requirements for an NMR metabolomics study:
http://www.springerlink.com/content/l774n76k4m86kj25/
Importantly, however, there were a number of modifications required to the original proposed reporting requirements. All the changes we made are summarised in a Table in the paper.
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Environmental Metabolomics Interest Group / Standard reference materials (SRMs) for Metabolomics
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Environmental Metabolomics Interest Group / eMICE_2011 Environmental Metabolomics Intercomparison Update
As a request to the community: please let Dan or I know about similar intercomparison studies, as it could be more beneficial if international efforts are aligned.
Mark Viant
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NMR Interest Group / New NMR library now available for 2-D J-resolved spectra....
Its the Birmingham Metabolite Library of NMR Spectra, a collection of 3328 experimental 1D and 2D J-resolved NMR spectra of 208 metabolite standards. This resource has been established by the metabolomics researchers at the University of Birmingham, UK, and was funded by the UK BBSRC.
The 2-D J-resolved spectra will soon be made available through other international databases, such as the BMRB and the HMDB.
Mark
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Environmental Metabolomics Interest Group / Environmental metabolomics makes Nature!
\"Evolution and metabolic significance of the urea cycle in photosynthetic diatoms\"
Author(s): Allen AE, Dupont CL, Obornik M, et al.
NATURE Volume: 473 Issue: 7346 Pages: 203-+ Published: MAY 12 2011
The bar has been raised!
Mark
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