How to analyze Agilent 6560 ion mobility AIF data? April 13, 2021, 02:54:12 PM Hi,I have a question about using MSDial to analyze the Agilent 6560 ion mobility AIF data. For example, in attached picture 1, when I select chromatography as the separation type, "SWATH-MS" and "All ion with multiple CES" option are available in the MS Method type. However, in attached picture 2, when I select the "Ion mobility" in the separation type, there is no option about "all ion with multiple CES" Thus, I am wondering how to use the MSDial to analyze the data which run under ion mobility and AIF using Agilent 6560. Thanks a lot Quote Selected
Re: How to analyze Agilent 6560 ion mobility AIF data? Reply #1 – June 07, 2021, 09:19:16 AM Hi.I have been working with AIF IMS data and to analyse them through MS-DIAL you should check Ion mobility and then data independent MS/MS. In my view, so far MS-DIAL is not able to distinguish the different energy collisions in this system. Hope it help you.Should you have more questions, please send me an email: acarolinarosa.16@gmail.comBest Regards,Ana Carolina Quote Selected
Re: How to analyze Agilent 6560 ion mobility AIF data? Reply #2 – June 27, 2021, 03:39:55 AM Hi, Ana is true. Sorry, at this moment, MS-DIAL cannot utilize the multiple CEs data at ion mobility project.Hiroshi Quote Selected