Identify the peak list processed by MZmine using NIST MS Search February 14, 2019, 08:35:51 PM Hello everyone,I used the MZmine2 software to analyze GC-MS data and NIST MS Search to identify the peak list.But I found that using the same parameter settings, I got different results.My parameters are set as follows:Spectrum RT tolerance: 3%Max. peaks per spectrum:10Must have same identities: yesMin. match factor: 700Min. reverse match factor: 700But I am not sure that the settings for Spectrum RT tolerance and Max. peaks per spectrum are correct?What references can I refer to?Thank you very much for your help.Pauline Quote Selected
Re: Identify the peak list processed by MZmine using NIST MS Search Reply #1 – February 25, 2019, 12:47:30 PM Hi Pauline, sorry I am not a MZmine2 user and can't answer your question. Does anyone from the community can help on this question? ThanksElena Quote Selected