Metabolomics Society Forum

Software => R => XCMS => Topic started by: phylloxera on June 03, 2016, 12:19:23 PM

Title: Help Getting Started With XCMS Online
Post by: phylloxera on June 03, 2016, 12:19:23 PM
Hi all,

I am new to XCMS Online, but so far nothing seems to be working as expected.

We uploaded 82 .raw files and all appear to be taking up space in our account ranging from 1.5-3 MB. However, only the first 7 are active. Are the rest still uploading (20+ days later) or did they fail a test of some sort?

I then attempted to duplicate the dataset in order to separate control and treatment groups. The status says copying but it still shows 0 files in the cloned dataset after a few hours. How long should this take?

In attempt to resolve some of these issues, I clicked on FAQ under help, resulting in xcmsonline1.scripps.edu refused to connect (chrome) or The server at xcmsonline1.scripps.edu is taking too long to respond (firefox).

I also tried setting up an HTML5 upload following the youtube video here: https://www.youtube.com/watch?v=qaCv-Q9hVFk (https://www.youtube.com/watch?v=qaCv-Q9hVFk) following forum topics here: http://metabolomics-forum.com/viewtopic ... f9ce4cb121 (http://metabolomics-forum.com/viewtopic.php?f=10&t=868&hilit=html5&sid=902a5b85f63c55c6c2e614f9ce4cb121) and here: http://metabolomics-forum.com/viewtopic ... f9ce4cb121 (http://metabolomics-forum.com/viewtopic.php?f=10&t=869&hilit=html5&sid=902a5b85f63c55c6c2e614f9ce4cb121)

But unfortunately, clicking on User Settings in Account yields a blank screen in both chrome and firefox.

I am working on a Windows 8 machine. Unsure how best to proceed readying my account for analysis.

Any advice is GREATLY appreciated :)

Aaron