Metabolomics Society Forum

Software => R => XCMS => Topic started by: titan100 on May 13, 2016, 07:38:29 AM

Title: converting Thermo .RAW profile mode to centroided mode
Post by: titan100 on May 13, 2016, 07:38:29 AM
Can you please suggest the tools to convert Thermo .RAW profile mode data to centroided data? Preferably window executable and other than ReAdW.

Titan
Title: Re: converting Thermo .RAW profile mode to centroided mode
Post by: Jan Stanstrup on May 17, 2016, 07:58:13 AM
msconvert from Proteowizard I would assume. There is also a GUI. You need to use the peakPicking filter for centroiding.

http://proteowizard.sourceforge.net/too ... nvert.html (http://proteowizard.sourceforge.net/tools/msconvert.html)
http://proteowizard.sourceforge.net/tools/filters.html (http://proteowizard.sourceforge.net/tools/filters.html)