Metabolomics Society Forum

Software => R => XCMS => Topic started by: longraihoney on May 24, 2016, 11:36:12 PM

Title: How to build Mass spectra using XCMS?
Post by: longraihoney on May 24, 2016, 11:36:12 PM
Dear all,

I used xcms downloaded from bioconductor to conduct "LC/MS Preprocessing and Analysis". The result file is nice. However, I just wonder how to build/plot Mass spectra using XCMS?

Any suggestion is appreciated.

Best.
Title: Re: How to build Mass spectra using XCMS?
Post by: Jan Stanstrup on May 25, 2016, 06:55:14 AM
I think you are looking for "getScan". It is however easier to browse the data with something like MzMine.