Re: Generating centWave Images(from Ralf's Bioinformatics pa
Reply #1 –
Have you tried using the "sleep" option for centWave which will generate similar visualizations ?
By using something like
pdf(file="myplots.pdf")
xcmsSet(method="centWave", sleep=0.0001,...)
dev.off()
you can save the plots to a pdf file.
To enable the Gaussian fits, turn on "fitgauss=TRUE".