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XCMS / XCMS fillPeaks.MSW
Error in seq.default((mmzpos - mrange[1]), (mmzpos + mrange[2])) :
'from' must be of length 1
I am not sure what is causing this error message to occur or how to fix it.
Xset<-xcmsSet(method="MSW", files=msFiles, scales=c(1,4,9),nearbyPeak=T, verbose.columns = FALSE, winSize.noise=500,
SNR.method="data.mean",snthr=5)
XsetG<-group(Xset, method="mzClust", mzppm=5)
XsetGf<-fillPeaks(XsetG, method="MSW")
Also using the xcmsSet function I am finding I get warning messages for each spectra
39: In `[<-`(`*tmp*`, "object", value = <S4 object of class structure("xcmsRaw", package = "xcms")>) :
implicit list embedding of S4 objects is deprecated