Metabolomics Society Forum

Software => MS-DIAL => Topic started by: Sophiadj on September 08, 2023, 04:03:17 AM

Title: Problem in converting NIST23 to MSDIAL compatible msp format
Post by: Sophiadj on September 08, 2023, 04:03:17 AM
Hi everyone,
I'm having a problem in converting NIST23 MS/MS library to MSDIAL compatible msp format.
I tried different settings, but none of them worked. Error "No spectra fromC:NISTDEMO\MSSEARCH hr msms nist" have been converted" kept popping out.  Below are snapshots of the settings.  I wonder if I got the setting wrong.
Thanks in advance!
Title: Re: Problem in converting NIST23 to MSDIAL compatible msp format
Post by: JMS on October 23, 2023, 01:23:11 PM
Hi Sophia,
We have gotten the exact same error message when trying to convert our NITS23 MS/MS library to msp using LIB2NIST. Have you been able to make any progress that you are willing to share? Thanks!

-Justin
Title: Re: Problem in converting NIST23 to MSDIAL compatible msp format
Post by: liyong189108 on October 26, 2023, 08:51:07 PM
The method of the following may be useful.
https://drchrispook.com/2021/04/08/convert-nist-mainlib-and-replib-ei-libraries-to-msp-format-to-annotate-gc-ms-data-with-ms-dial/