Metabolomics Society Forum

Software => R => XCMS => Topic started by: KambizGilany on December 22, 2013, 02:56:50 AM

Title: How to upload my GCMS data?
Post by: KambizGilany on December 22, 2013, 02:56:50 AM
Hi everybody
My data is from GCMS varaint instrumnet with .SMS file format. I want to upload my data to XCMS for further analysis? How can I proceed further? How can I creat the file format which is accepted by XCMS?

Merci,
Kambiz
Title: Re: How to upload my GCMS data?
Post by: allend on December 22, 2013, 08:33:00 AM
You can use xms2mzxml.exe to convert Varian sms and .xms datafiles to mzxml format. http://members.optusnet.com.au/david.a58/msutils.html (http://members.optusnet.com.au/david.a58/msutils.html)