I processed the .abf files in MS-DIAL version 4.38 and exported the ion table to MSP files. But when I try to perform the compound annotation (batch job) search in MS-FINDER version 3.46, an error message appears. I´ve attached images with the parameters setting and error warning. Does somebody has also experienced this in the analysis?
I´m trying to convert MS data acquired in an Orbitrap equipment (Thermo Scientific), which is .RAW files, using the ABF Converter. However, when I try to select and input the files it doesn´t appear in the window, Can somebody give me instructions about the conversion of .RAW to ABF files?
I´ve been having some problems with the alignment process in MS-DIAL. I´m only using one sample and it's blank file and some errors are occurring. I´m using minimum amplitude cut off as 1000, but even lowering its value the same error still occurs. I checked the MZml files of the sample and blank and the files aren´t destroyed, as they can be analyzed in other software. Does anybody else have these troubles? I also would like to know if there is a need to set some configuration in the windows 10 to MS-DIAL and MS-FINDER work well.