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sneumann
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Date Registered:
June 22, 2011, 12:24:36 PM
Last Active:
September 14, 2018, 01:22:57 AM
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September 18, 2018, 06:55:26 PM

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IPB Halle                          Mass spectrometry & Bioinformatics
Dr. Steffen Neumann         http://www.IPB-Halle.DE
Weinberg 3 06120 Halle     Tel. +49 (0) 345 5582 - 1470
sneumann(at)IPB-Halle.DE

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Recent Posts

Message Board Subject Date
Hi, in pwiz you have the mscat command line tool, in R you can use mzR for reading raw mz* data,and/or MSnbase for a higher-l... Other Re: Conversion from .... August 20, 2018, 05:10:35 AM
Hi, the `xcmsFragments` is a rather old object class.Your might want to look into the XCMS3 interface, that heavily relies on... XCMS Re: export XCMS2 frag... August 20, 2018, 05:08:43 AM
Hi,which peak exactly are you missing ? As you see below, I can happily find the M184T407.Yours,SteffenCode: [Select]sneumann... XCMS Re: Optimize peak-pic... April 12, 2017, 03:33:32 AM
Thanks for the question. I think adding other integration methods into fillPeaks would be not entirely trivial,but might be p... XCMS Re: fillpeaks creates... January 19, 2017, 09:01:58 AM
ok, so general strategy I'd recommend is to first have very lax parameters for the group()ing and retcor() to see which sampl... XCMS Re: RT correction_ 3 ... January 18, 2017, 02:49:38 AM
Hi Sanju, depending on data, this should be possible. Some questions: What Chromatography / gradient are you using ?What MS a... XCMS Re: RT correction_ 3 ... January 17, 2017, 01:53:31 AM
The Leibniz Institute of Plant Biochemistry (IPB) is an international research institute located on the Weinberg-campus in Ha... Job opportunities PhD position Bioinfor... January 05, 2017, 08:27:48 AM
The Leibniz Institute of Plant Biochemistry (IPB) is an international research institute located on the Weinberg-campus in Ha... Job opportunities Vacancy: Two Postdoc ... June 29, 2016, 05:13:51 AM
Hi, yes I can reproduce it, and tracking it on https://github.com/sneumann/CAMERA/issues/8One thing is that you don't use the... CAMERA Re: plotPsSpectrum error April 24, 2016, 11:54:32 PM
Hi Mike, can you post a self-contained (cut&pastable) example ?You can use the data from either packages faahKO or mtbls2.You... CAMERA Re: plotPsSpectrum error April 22, 2016, 01:37:58 PM

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