Metabolomics Society Forum

Software => Other => Topic started by: rays on February 12, 2020, 04:46:04 PM

Title: Software for generating deisotoped and charge state deconvoluted MS1 peaks
Post by: rays on February 12, 2020, 04:46:04 PM
Hello All,

I'm looking for a Software for generating deisotoped and charge state deconvoluted MS1 peaks for metabolite data.
Thanks in advance
Title: Re: Software for generating deisotoped and charge state deconvoluted MS1 peaks
Post by: Jan Stanstrup on February 13, 2020, 02:23:11 AM
Deconvolution in the sense of one feature/variable per peak doesn't exist out of the box in any software for untargeted LC-MS that I am aware of.

The most common tools for untargeted data would be XCMS+CAMERA or MZmine. There is nothing straight forward about doing this on untargeted data though.
Title: Re: Software for generating deisotoped and charge state deconvoluted MS1 peaks
Post by: rays on February 13, 2020, 11:22:37 AM
Thanks for the information, much appreciated