Print Page - Delete features

Title: Delete features
Post by: spapaz on March 24, 2020, 06:25:19 AM

Hi Hiroshi,

would it be possible with the next version, to add the possibility to delete a feature directly from the Alignment Table (e.g. right click--> delete) ? That would be great while doing manual inspection of the features

Thanks!

Stefano

Title: Re: Delete features
Post by: spapaz on March 24, 2020, 08:42:00 AM

And, the other way round. Would it be possible to have the functionality to "add" a new feature
E.g. similarly as from the table chromatogram viewer for manual curation?

Title: Re: Delete features
Post by: spapaz on March 24, 2020, 08:43:14 AM

like from this window:

Title: Re: Delete features
Post by: romanas chaleckis on March 24, 2020, 07:20:56 PM

as far I as know no option to delete - just add comment for filtering/sorting. Manual addition of peaks is also not (yet?) implemented...

Title: Re: Delete features
Post by: Hiroshi Tsugawa on March 27, 2020, 08:34:27 AM

Thanks Romanas for the post.
Yes, as you know, that is what we should do for further update.
Now, we are renewing the source code structure of msdial and msfinder for future update to deal with many other data including imaging ms and other omics layers like proteomics.
Then, we will tackle this suggestion.

Thanks,

Hiroshi

Title: Re: Delete features
Post by: spapaz on March 27, 2020, 08:44:32 AM

Nice, thank you!
Imaging mass-spec within MS-DIAL would be wonderful.
If it can help for some ideas on how to visualize and explore MSI data, you can check these nice projects:
OpenMSI: https://openmsi.nersc.gov/openmsi/client/
and
METASPACE: https://metaspace2020.eu/datasets

Metabolomics Society Forum

Software => MS-DIAL => Topic started by: spapaz on March 24, 2020, 06:25:19 AM