I have procesed GC-MS data with MS-Dial and now wish to export the data to GNPS to perform feature based molecular networking. The GNPS data export option in MS-Dial (Ver 4.7) is unfortunately not available (see attached image) and the mgf file created using other exporting options does not meet GNPS requirements.
In a previous post in this forum it was mentioned that one had to go to Data vizualization -> molecular spectrum networking after alignment. This however just open a network in the browser with no options for exporting a GNPS compatible mgf file and does not seem to solve the problem.
Suggestions for how to solve this would be most welcomed!
sorry, I did not prepare the export option of gnps for GC-MS project.
I will ask the GNPS developers to know what kind of gnps format is required as the export format.
Thanks Hiroshi! Do you plan to implement GNPS export for GC-MS data in the future?
I had the same problem. No solution yet.