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Title: Phenlyalanine Derived Compound Database?
Post by: Cole Wunderlich on February 28, 2014, 12:50:56 PM

Hello all,

I am doing metabolomics work on the phenylpropanoid pathway in At Col-0 using LC-MS and was wondering if any of you know of a good metabolite database (aside from knapsack) for At metabolites or for phenylpropanoids in general.

Thanks,
Cole

Title: Re: Phenlyalanine Derived Compound Database?
Post by: t.stratton on December 11, 2014, 05:08:35 PM

Cole,

You might want to check ReSpect for phytochemicals (http://spectra.psc.riken.jp/menta.cgi/respect/index (http://spectra.psc.riken.jp/menta.cgi/respect/index)). It's almost all nominal mass but it's free and a good start. HRAM libraries like mzCloud.org don't have enough coverage of plant chemical space yet, but that will change in time.

TS

Title: Re: Phenlyalanine Derived Compound Database?
Post by: Abraham12li on February 26, 2015, 04:57:27 AM

am doing metabolomics work on the phenylpropanoid pathway in At Col-0 using LC-MS and was wondering
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Databases => Other metabolomics resources => Topic started by: Cole Wunderlich on February 28, 2014, 12:50:56 PM