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Topic: "MS1 factor" and "RT factor" (Read 2467 times) previous topic - next topic

"MS1 factor" and "RT factor"

Hi,

my question refers to the MS-Dial parameters "MS1 factor" and "RT factor". As I understand right, the parameters determine the weighting of mass and retention time (deviations) used for calculating the total score of an feature annotated by the post-identification process.

However, are those parameter also relevant when using an MSP-file for feature annotation,
i.e. do the values for "MS1 factor" and "RT factor" also have impact on the total score calculation of an MSP-file annotated feature?

Can anyone comment on this?
Thanks!

Best regards
FalcoB