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Topic: MSFINDER tool "MSP TO SEPARATED MSP files" not working (Read 3411 times) previous topic - next topic

MSFINDER tool "MSP TO SEPARATED MSP files" not working

Dear all,
I need to convert the msp file (containing the representative spectra of my alignment results exported from MSDIAL) in separated msp files. I then want to import these files in MSFINDER for a batch job.
When using the MSFINDER tool to do this, the program crashes before finishing the job. This does not happen if I use the "mgf to separated msp". Representative spectra exported as mgf lose most of the important feature's metadata though, therefore I'd rather export my representative spectra in msp.
Does anyone know how to solve this problem? Alternatively, do you know another way to separate the msp file?

Thanks a lot in advance for your help,
Andrea
 

Re: MSFINDER tool "MSP TO SEPARATED MSP files" not working

Reply #1 –
Please send me your MSP, I will check the program ASAP.
Thanks,

Hiroshi

Re: MSFINDER tool "MSP TO SEPARATED MSP files" not working

Reply #2 –
Hi Andrea,

thank you for sending an example file to me.
I fixed the bug, and please try to use the following development version of msfinder.
https://briefcase.riken.jp/public/59RcQA5n2whAVWM

Hiroshi

Re: MSFINDER tool "MSP TO SEPARATED MSP files" not working

Reply #3 –
Quote from: Hiroshi Tsugawa – on
Hi Andrea,

thank you for sending an example file to me.
I fixed the bug, and please try to use the following development version of msfinder.
https://briefcase.riken.jp/public/59RcQA5n2whAVWM

Hiroshi

Hi Hiroshi,
Now the tool is working well.
Thanks a lot for the work you are doing

Andrea