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Topic: ms1 and msms data from MSDIAL to SIRIUS (Read 3197 times) previous topic - next topic

ms1 and msms data from MSDIAL to SIRIUS

Hello dears,

How could I export the ms1 and ms2 data together from an alignment result using MS-DIAL in order to obtain in SIRIUS, additional to the scores provided with ms2 data, the SIRIUS isotope score.
I can see that I can from MS-DIAL export the MGF file with the msms data, but when I try to process this in SIRIUS, I have not the ms1 data that could be usefull for the annotation using the SIRIUS isotope score.


Kind Regards.


Re: ms1 and msms data from MSDIAL to SIRIUS

Reply #2
Sorry, SIRIUS export will be supported very soon in the new version of MS-DIAL. Our plan is delayed actually. Sorry. Hiroshi

Re: ms1 and msms data from MSDIAL to SIRIUS

Reply #3
Hi,

I implemented the export function for SIRIUS ms format file. However, although it is the same situation in msfinder mat format, the current MS-DIAL program does not have the ms1 isotope information in the alignment result table. Therefore, the function is currently available at

Export -> Peaklist export -> Change the export format to .ms.
Then, you can obtain .ms file for all spectra for all analysis files imported.

I will upload the new version of ms-dial within next two weeks.
Thanks,

Hiroshi