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Topic: mzMine parameter optimisation/guidance (Read 531 times) previous topic - next topic

mzMine parameter optimisation/guidance

Hi all,

Has anyone managed to find a quick guide on how each parameter on mzmine can be optimised based on the data. i.e. what and where to look in the spectra to set min height, or max intensity, or noise threshold values etc.? - or are we all eyeballing it?

I use it mostly for untargeted LC work. GC does not work for me and crashes more often than MS DIAL does.

Thank you