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Topic: Raw Data Alignment Error (Read 6286 times) previous topic - next topic

Raw Data Alignment Error

Hi Ralf,

I am getting error while performing "Raw Data Alignment". I am providing a screenshot of the error I am getting. Please suggest as in what should I do?


Cheers
Plasma33

Re: Raw Data Alignment Error

Reply #1
Did you move raw data or results after XCMS processing ?

Re: Raw Data Alignment Error

Reply #2
I did XCMS online and downloaded the results. And the raw data are in the same folder while I was doing XCMS online. Now results are in separate folders as I wanted to compare 3 sets. So 3 different folders for 3 results. And raw data are in different folder. But its in the same folder while I was doing XCMS online.

Thanks


Re: Raw Data Alignment Error

Reply #4
But XCMS online provides results that can be downloaded and which are compatabile with meta-XCMS. Like XCMS provides data in .csv and .tsv format which are easily read by meta-XCMS. Its only the raw data that are not recognized/assigned by meta-XCMS. But will do go through the paper which you have provided.

Thanks

Re: Raw Data Alignment Error

Reply #5
Got it Ralf. That paper really helped me a lot.

Thanks