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Topic: rawEIC return in seconds (Read 4921 times) previous topic - next topic

rawEIC return in seconds

Is there any way to get rawEIC() to return Rt time in seconds instead of scan number?

Thanks,
Cole

Re: rawEIC return in seconds

Reply #1
Hi Cole,

no, not directly. But you can:

Code: [Select]
library(faahKO)
library(xcms)
xr <- xcmsRaw(filepaths(faahko)[1])
e <- rawEIC(xr, mzrange=c(300.5, 301.5))
xr@scantime[e$scan]

Yours,
Steffen
--
IPB Halle                          Mass spectrometry & Bioinformatics
Dr. Steffen Neumann         http://www.IPB-Halle.DE
Weinberg 3 06120 Halle     Tel. +49 (0) 345 5582 - 1470
sneumann(at)IPB-Halle.DE

 

Re: rawEIC return in seconds

Reply #2
Ok, thanks for your help!

Cole