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Topic: Phenlyalanine Derived Compound Database? (Read 8490 times) previous topic - next topic

Phenlyalanine Derived Compound Database?
Hello all,

I am doing metabolomics work on the phenylpropanoid pathway in At Col-0 using LC-MS and was wondering if any of you know of a good metabolite database (aside from knapsack) for At metabolites or for phenylpropanoids in general.

Thanks,
Cole

  • t.stratton
  • [*]
Re: Phenlyalanine Derived Compound Database?
Reply #1
Cole,

You might want to check ReSpect for phytochemicals (http://spectra.psc.riken.jp/menta.cgi/respect/index).  It's almost all nominal mass but it's free and a good start.  HRAM libraries like mzCloud.org don't have enough coverage of plant chemical space yet, but that will change in time.

TS

  • Abraham12li
  • [*]
Re: Phenlyalanine Derived Compound Database?
Reply #2
am doing metabolomics work on the phenylpropanoid pathway in At Col-0 using LC-MS and was wondering
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