Skip to main content
Topic: does XCMSonline support mutiple comparison correction? (Read 3483 times) previous topic - next topic

does XCMSonline support mutiple comparison correction?

Hi,
I checked the statistics part of XCMS online, it seems it does not support the mutiple comparisons correction, does it?
Or, can I do a post-analysis, say Bonferroni or Benjamini correction, or FDR calculation, somewhere in the XCMS-online workflow?
thanks!

SunSun

Re: does XCMSonline support mutiple comparison correction?

Reply #1
SunSun,

XCMS Online uses q-values which are shown by default in multiview but need to be selected from the column view in pairwise.

Cheers,

Paul
~~
H. Paul Benton
Scripps Research Institute
If you have an error with XCMS Online please send me the JOBID and submit an error via the XCMS Online contact page