Skip to main content
Topic: mzR installation on Ubuntu 16.04 server fails (Read 4008 times) previous topic - next topic

mzR installation on Ubuntu 16.04 server fails

Hello,

I'm currently trying to install the XCMS package on my RStudio server (0.99.896) which is running on Ubuntu 16.04 server amd-64. However I'm having some issues installing the dependency mzR. I receive the following error message:

collect2: error: ld returned 1 exit status
/usr/share/R/share/make/shlib.mk:6: recipe for target 'mzR.so' failed
make: *** [mzR.so] Error 1
ERROR: compilation failed for package ‘mzR’
* removing ‘/home/daniel/R/x86_64-pc-linux-gnu-library/3.2/mzR’
ERROR: dependency ‘mzR’ is not available for package ‘xcms’
* removing ‘/home/daniel/R/x86_64-pc-linux-gnu-library/3.2/xcms’

I've already downgraded gcc to 4.9.3, unfortunately this didn't solve the problem.

Hase anyone encountered this issue before and knows how to fix it?

Thanks

Daniel