Re: Q-value calculation
Reply #1 –
Stage,
This has happened because one or more than one of the p-values were not calculated and are NA's. This could be due to the all classes having the same intensity values and so the test could not be completed for that feature. For q-value calculation the p-value distribution is required. Missing values make the distribution uncertain and so q-values are therefore not calculated.
Cheers,
Paul