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XCMS / massifquant throwing a lot of messages
I thought I would give massifquant a whirl. I realise its experimental.
Here are the parameters I am using:
xset <- xcmsSet(files = files,
profmethod="bin",
profparam = list(step=0.01),
nSlaves= 4,
method = "massifquant",
minIntensity = 3200,
minCentroids = 12,
consecMissedLim = 2,
criticalVal = 1.5,
ppm = 10,
segs= 1,
scanBack = 1)
The message that floods the terminal is "Upper Edge case deleted"
Please advise?