Re: Software for generating deisotoped and charge state deconvoluted MS1 peaks
Reply #1 –
Deconvolution in the sense of one feature/variable per peak doesn't exist out of the box in any software for untargeted LC-MS that I am aware of.
The most common tools for untargeted data would be XCMS+CAMERA or MZmine. There is nothing straight forward about doing this on untargeted data though.