MSDial crashes after closing Table viewer April 19, 2021, 01:28:49 AM Dear all,at the moment I have small sets of samples (around 100 per experiment).The problem I am facing with all my different experiments is after I close the Table viewer for the aligned chromatograms, the program crashes about 20% of the time. I have the feeling, the longer I am in the table viewer, the higher the chances are.Is there a logfile or a debugging mode I can view/switch on?Thank you,all the best,MartinLanguage: English (UK)Windows 10 ProMS-DIAL ver. 4.60#Data typeData type CentroidIon mode PositiveAccuracy type IsNominal#Data collection parametersRetention time begin 0Retention time end 45Mass range begin 50Mass range end 600#Data processingNumber of threads 4#Peak detection parametersSmoothing method LinearWeightedMovingAverageSmoothing level 3Average peak width 20Minimum peak height 1000Mass slice width 0.5Mass accuracy 0.5#MS1Dec parametersSigma window value 0.5Amplitude cut off 10#identificationMSP file F:\Biology\Libraries\GCMS DB_FiehnBinbase-KovatRI-VS2.mspRI index file see lastRetention type RIRI compound AlkanesRetention time tolerance 0.5Retention index tolerance 25EI similarity library tolerance 70Identification score cut off 70Use retention information for scoring TrueUse retention information for filtering FalseUse quant masses defined in MSP format file True#Alignment parameters settingReference file F:\Biology\Data\2021_Macro_ExpII_IntSt-MB\BT TOF\mzml\abf\Pool_1_b1_SL_start_275sec.abfRetention time RIRetention index tolerance 20Retention time tolerance 0.075EI similarity tolerance 70Retention time factor 0.5EI similarity factor 0.5Identification after alignment FalseGap filling by compulsion TrueBasepeak mz selected as the representative quant mass False#Filtering settingPeak count filter 0N% detected in at least one group 0Remove feature based on peak height fold-change TrueSample max / blank average 5Sample average / blank average 5Keep identified and annotated metabolites TrueKeep removable features and assign the tag for checking True#RI dictionary (analysis file path / ri dictionary file path)cropped Quote Selected
Re: MSDial crashes after closing Table viewer Reply #1 – April 21, 2021, 01:09:27 AM Dear Martin,In my experience, if I am editing the alignment table (see picture below), and at the same time press Ctrl + D to change the feature to unknown, the program will crash. It happens all the time. So, to change the feature to Unknown in the alignment table, we have to make sure that we are not editing the table. I don't know if this is your situation. Hope it is helpful for you. Best,Sukis Quote Selected
Re: MSDial crashes after closing Table viewer Reply #2 – April 21, 2021, 01:36:06 AM Dear Skuis,thank you for your reply!Maybe the problems are somehow connected that you have it while editing the alignment table, and I have it in the table viewer.Does the crash also mostly/always happen when you close the window?All the best,Martin Quote Selected
Re: MSDial crashes after closing Table viewer Reply #3 – April 21, 2021, 01:48:41 AM It does not happen when I close the windows.Best,Sukis Quote Selected
Re: MSDial crashes after closing Table viewer Reply #4 – April 21, 2021, 02:14:34 AM Thank you for checking!All the best,Martin Quote Selected